2018
- A. Castellini, G. Beltrame, M. Bicego, J. Blum, M. Denitto, A. Farinelli. Unsupervised activity recognition for autonomous water drones. In 33rd ACM/SIGAPP Symposium On Applied Computing (SAC 2018), Pau, France, April
9-13, 2018 , pages 840-842, ACM, 2018. (link)(bibtex).
- A. Castellini, A. Farinelli, G. Minuto, D. Quaglia, I. Secco, F. Tinivella. EXPO-AGRI: Smart Automatic Greenhouse Control. In FoodCAS 2017 Electronics for Better Quality of Food, IEEE Biomedical Circuits and Systems Conference (BioCAS), Torino, October 20, 2017, pages 476-479, IEEE, 2018. (link)(bibtex).
- A. Castellini, G. Franco. Detection of age-related changes in networks of B cells by multivariate time-series analysis. In MOD 2017 - The third International Conference on Machine Learning, Optimization and Big Data, Volterra, Italy, September 14-17, 2017, Lecture Notes in Computer Science, volume 10710, pages 586-597, Springer-Verlag, 2018. (link)(bibtex).
- A. Castellini, G. A. Beltrame, M. Bicego, D. Bloisi, J. J. Blum, M. Denitto, A. Farinelli. Activity recognition for autonomous water drones based on unsupervised learning methods. In 4th Italian Workshop on Artificial Intelligenceand Robotics (AIRO 2017), International Conference of the Italian Association for Artificial Intelligence (AI*IA 2017), Bari, Italy, November 14-17, 2017, pages 16-21, CEUR Workshop Proceedings AI*IA Series 2054, 2018. (link)(bibtex).
2017
- A. Castellini, G. Franco and A. Vella. Age-related relationships among peripheral B lymphocyte subpopulations. In 2017 IEEE Congress on Evolutionary Computation (CEC) , San Sebastian, 2017, pages 1864-1871, IEEE, 2017. (link)(bibtex).
- A. Castellini, G. Franco. Multivariate time-series segmentation for immunological data analysis. In 6th International Symposium - From Data to Models and Back (DataMod 2017), satellite event of the 15th International Conference on Software Engineering and Formal Methods (SEFM 2017), Trento, Italy, September 4-5, 2017. (link)(bibtex).
2015
- A. Castellini, D. Paltrinieri, V. Manca. MP-GeneticSynth: Inferring biological network regulations from time series. Bioinformatics, 31(5):785–787, Oxford University Press, 2015 (link)(bibtex).
- A. Castellini, V. Manca, M. Zucchelli. An evolutionary procedure for inferring MP systems regulation functions of biological networks. Natural Computing, 14(3):375–391, Springer, 2015 (link)(bibtex).
- A. Castellini, G. Franco, A. Milanese. A genome analysis based on repeat sharing gene networks. Natural Computing, 14(3):403–420, Springer, 2015 (link)(bibtex).
- A. Castellini, C. Edlich-Muth, M. Muraya, C. Klukas. Towards a graph-theoretic approach to hybrid performance prediction from large-scale phenotypic data. In 10th International Conference on Information Processing in Cells and Tissues, IPCAT 2015 , San Diego, California, USA, September 14-16 2015, Lecture Notes in Computer Science, volume 9303, pages 271-285, Springer-Verlag, 2015. (link)(bibtex).
- C. Edlich-Muth, A. Castellini, J. Selbig, Z. Nikoloski. Towards genetic and biomarker-assisted predictive breeding of maize hybrids. In PLANT 2030 Status Seminar 2015, Potsdam, Germany, 2015. (link)(bibtex).
2014
- A. Castellini, G. Franco, V. Manca, R. Ortolani, A. Vella. Towards an MP Model for B lymphocytes maturation. In 13th International Conference on Unconventional Computation and Natural Computation, UCNC 2014 , London, Ontario, Canada, July 14-18, 2014, Lecture Notes in Computer Science, volume 8553, pages 80-92, Springer-Verlag, 2014. (link)(bibtex).
2013
- A. Castellini, M. Zucchelli, M. Busato, V. Manca. From time series to biological network regulations: an evolutionary approach. Molecular BioSystems, 9(2):225–233, The Royal Society of Chemistry, 2013 (link)(bibtex).
- V. Manca, A. Castellini, G. Franco, L. Marchetti, R. Pagliarini. Metabolic P Systems: A Discrete Model for Biological Dynamics. Chinese Journal of Electronics, 22(4):717–723, 2013 (link)(bibtex).
2012
- A. Castellini, G. Franco, V. Manca. A dictionary based informational genome analysis. BMC Genomics, 13(1):485+, 2012. (link)(bibtex).
- A. Castellini, V. Manca, M. Zucchelli, M. Busato. A genetic approach for synthesizing metabolic models from time series. In T. Soule and J. H. Moore, editors, GECCO ’12: Companion Material Proceedings of the 11th Annual conference on Genetic and evolutionary computation, July 7-11, 2012, Philadelphia, PA, USA, pages 1415-1416, ACM, 2012. (link)(bibtex).
- A. Castellini, V. Manca, M. Zucchelli. Towards an evolutionary procedure for reverse-engineering biological networks. In the 11th International Conference on Artificial Immune Systems, ICARIS 2012, Taormina, Italy, August 28-31, 2012, Lecture Notes in Computer Science, volume 7597, pages 271-285, Springer-Verlag, 2012 (link)(bibtex).
2011
- A. Castellini, G. Franco, R. Pagliarini. Data analysis pipeline from laboratory to MP models. Natural Computing, 10(1):55-76, 2011. (link)(bibtex).
- A. Castellini, V. Manca, M. Bicego, S. Compri, V. Marino, G. Tosadori. Genome classification by dictionary-based indexes. 6th International Conference on Pattern Recognition in Bioinformatics, Delft, The Netherlands, November 2-4, 2011.
- A. Castellini. Business Intelligence and Data Mining in Biomedical Research Master thesis, Master in Business Intelligence e Knowledge Management, Faculty of Economics, University of Verona, 2011 (winner of the award "Premio Martello" for the best master thesis).
2010
- A. Castellini, G. Franco, V. Manca. Hybrid functional Petri nets as MP systems. Natural Computing, 9(1):61–81, March 2010 (link)(bibtex).
- A. Castellini, V. Manca, Y. Suzuki. Metabolic P system flux regulation by artificial neural networks. In 10th International Workshop on Membrane Computing, WMC 2009, Curtea de Arges, Romania, August 24-27, 2009, Revised, Selected and Invited Papers, G. Paun, et al., editors, Lecture Notes in Computer Science, volume 5957, pages 196-209, Springer-Verlag, 2010 (link)(bibtex).
- A. Castellini. Algorithms and Software for Biological MP Modeling by Statistical and Optimization Techniques, PhD thesis, Department of Computer Science, University of Verona, 2010 (winner of MIMOS award).
2009
- A. Castellini, V. Manca. Learning regulation functions of metabolic systems by artificial neural networks. In F. Rothlauf, editor, GECCO ’09: Proceedings of the 11th Annual conference on Genetic and evolutionary computation, July 8-12, 2009, Montreal Canada, pages 193-200, ACM, New York, NY, USA, 2009. (link)(bibtex).
- A. Castellini, G. Franco, V. Manca. Toward a representation of hybrid functional Petri nets by MP systems. In 2nd International Workshop on Natural Computing, Nagoya, Japan, December 10-13, 2007, Y. Suzuki, et al., editors, Natural computing, volume 1 of Proceedings in Information and Communications Technology, pages 28-37. Springer Japan, 2009 (link)(bibtex).
- A. Castellini, V. Manca. MetaPlab: A computational framework for Metabolic P systems. In 9th International Workshop on Membrane Computing, WMC 2008, Edinburgh, UK, July 28-31, 2008, Revised, Selected and Invited Papers, D. W. Corne, et al., editors, Lecture Notes in Computer Science, volume 5391, pages 157-168. Springer-Verlag, 2009 (link)(bibtex).
- V. Manca, A. Castellini, G. Franco, L. Marchetti, R. Pagliarini. Metaplab 1.1 user guide. MetaPlab website, 2009 (link)(bibtex)(bibtex).
2008
- A. Castellini, V. Manca, L. Marchetti. MP systems and hybrid Petri nets. In International Workshop on Nature Inspired Cooperative Strategies for Optimization, NICSO 2007, Acireale, Italy, November, 8-10, 2007, N. Krasnogor, et al., editors, Studies in Computational Intelligence 129, pages 53-62, Springer, 2008 (link)(bibtex).
- A. Castellini, G. Franco. On modelling signal transduction networks. In D. Diaz-Pernil, et al., Proceedings of Sixth Brainstorming Week on Membrane Computing, BWMC6, February 4-8, 2008, Sevilla, Spain, pages 67-77, Fenix Editora, 2008 (link)(bibtex).
2007
- L. Bianco, A. Castellini. Psim: A computational platform for Metabolic P systems. In 8th International Workshop on Membrane Computing, WMC 2007, Thessaloniki, Greece, June 25-28, 2007, Revised, Selected and Invited Papers, G. Eleftherakis, et al., editors, Lecture Notes in
Computer Science, volume 4860, pages 1-20, Springer-Verlag, 2007 (link)(bibtex).
- A. Castellini. Albero delle Tecnologie. Technical report, Italian Space Agency, Rome, 2007.
2006
- A. Castellini. Simulazioni computazionali di operazioni del "DNA Computing", Master thesis, Faculty of Computer Science, University of Verona, 2006.
2005
- A. Castellini. Human body tracking using particle swarm optimization. 2005. Technical report about the the research work developed during the Erasmus project at the Group of Computer Vision, Department of Electrical Electronic and Computer Engineering, Heriot Watt University, Edinburgh, UK, 2005.
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