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Top 10 publications
from the (now dismissed) Nitric
Oxide lab:
- Delledonne M., Xia Y., Dixon R. and
Lamb C. (1998). Nitric oxide functions as a signal
in plant disease resistance. Nature
394:585-558
- Solomon M., Belenghi B., Delledonne
M., Levine A. (1999). The involvement of cysteine
proteases and protease inhibitor genes in the
regulation of programmed cell death in plants. Plant
Cell 11:431-443
- Delledonne M., Zeier J., Marocco A.,
Lamb C. (2001) . Signal interactions between nitric
oxide and reactive oxygen intermediates in the plant
hypersensitive disease resistance response. Proc.
Natl. Acad. Sci. USA 98:13454-13459
- Zeier J., Delledonne M., Severi E.,
Sonoda M., Lamb C. (2004). Genetic elucidation of
nitric oxide signaling in incompatible
plant-pathogen interactions. Plant Physiol.
136:2875-2886
- Perazzolli M., Dominici P.,
Romero-Puertas M., Zago E., Zeier J., Sonoda M.,
Lamb C., Delledonne M. (2004) Arabidopsis
non-symbiotic hemoglobin AHb1 modulates nitric
oxide bioactivity. Plant Cell 16:2785-2794
- Boccara M., Mills C., Zeier J., Anzi
C., Lamb C., Poole R., Delledonne M. (2005)
Flavohaemoglobin HmpX from Erwinia chrysanthemi confers
nitrosative stress tolerance and affects the plant
hypersensitive reaction by intercepting nitric oxide
produced by the host . Plant J. 43:226-237
- Zaninotto F., La Camera S.,
Polverari A., Delledonne M. (2006) Cross talk
between reactive nitrogen and oxygen species during
the hypersensitive response. Plant Physiol.
141: 379-383
- Zago E., Morsa S., Dat J.F., Alard
P., Ferrarini A., Inzè D., Delledonne M., Van
Breusegem F. (2006) Nitric oxide- and hydrogen
peroxide-responsive gene regulation during cell
death induction in tobacco. Plant Physiol. 141: 404-411
- Romero-Puertas M.C., Laxa M., Mattè
A., Zaninotto F., Finkemeier I., Jones A.M.E.,
Perazzolli M., Vandelle E., Dietz K.J., Delledonne
M. (2007) S-nitrosylation of peroxiredoxin II E
promotes peroxynitrite-mediated tyrosine nitration.
Plant Cell
19: 4120-4130
- Ling T,
Bellin D, Vandelle E, Imanifard Z,
Delledonne M. (2017). Host-Mediated
S-Nitrosylation Disarms the Bacterial
Effector HopAI1 to Reestablish Immunity. Plant Cell
11:2871-2881
Top 10 publications
from the Functional Genomics
lab:
- The French–Italian Public Consortium
for Grapevine Genome Characterization. (2007). The
grapevine genome sequence suggests ancestral
hexaploidization in major angiosperm phyla. Nature 449:
463-467
- Denoeud
F., Aury JM., Da Silva C., Noel B., Rogier
O., Delledonne M., Morgante M., Valle
G., Wincker P., Scarpelli C., Jaillon
O., Artiguenave F. (2008) Annotating genomes
with massive-scale RNA-sequencing. Genome Biology
9: R175
- Ventura
M., Turroni F., Zomer A., Foroni E.,
Giubellini V., Bottacini F., Canchaya C.,
Claesson M.J., He F., Mantzourani M., Mulas
L., Ferrarini A., Gao B., Delledonne M.,
Henrissat B., Coutinho P., Oggioni M., Gupta
R.S., Zhang Z., Beighton D., Fitzgerald
G.F., O’Toole P.W., van Sinderen D. (2009).
The Bifidobacterium
dentium Bd1 genome sequence
reflects its genetic adaptation to the human
oral cavity. PLoS Genetics 5(12): e1000785
- The International Cancer Genome
Consortium. (2010). International network of cancer
genome projects. Nature
464:993-998
- Turroni
F., Bottacini F., Foroni E., Mulder I., Kim
J.H., Zomer A., Garcia B.S., Bidossi A.,
Ferrarini A., Giubellini V., Delledonne M.,
Henrissat B., Coutinho P., Oggioni M.,
Fitzgerald G.F., Mills D., Margolles A.,
Kelly D., van Sinderen D., Ventura M.
(2010). Genome analysis of Bifidobacterium
bifidum PRL2010 reveals metabolic
pathways for host-derived glycan foraging. Proc Natl Acad
Sci. USA 107: 19514-19519
- Mele C.,
Iatropoulos P., Donadelli R., Calabria A.,
Maranta R., Cassis P., Buelli S., Tomasoni
S., Piras R., Krendel M., Bettoni S., Morigi
M., Delledonne M., Pecoraro C., Abbate I.,
Capobianchi M.R., Hildebrandt F., Otto E.,
Schaefer F., Macciardi F., Ozaltin F., Emre
S., Ibsirlioglu T., Benigni A., Remuzzi G.
and Noris M. (2011). MYO1E
mutations and childhood familial focal
segmental glomerulosclerosis. New Engl. J.
Med. 365 : 295-306
- Dal Santo
S., Tornielli G., Zenoni S., Fasoli M.,
Farina L., Anesi A., Guzzo F., Delledonne
M., Pezzotti M. (2013). The plasticity of
the grapevine berry transcriptome. Genome Biol. 14:
R54
- Da Silva
C., Zamperin G., Ferrarini A., Minio A., Dal
Molin A., Venturini L., Buson G.,
TononiP., Avanzato C., Zago E., Boido
E., Dellacassa E., Gaggero C., Pezzotti M.,
Carrau F., Delledonne M. (2013). The high
polyphenol content of Vitis vinifera cv.
Tannat berries is conferred mostly by genes
that are not shared with the reference
genome. Plant
Cell 25:4777-4788
- Venturini
L, Delledonne M. (2015) Symbiotic
plant-fungi interactions stripped down to
the root. Nature
Genet. 2015 47: 309-310
- Chin C.S.,
Peluso P., Sedlazeck F.J., Nattestad M.,
Concepcion G.T., Clum A., Dunn C., O'Malley
R., Figueroa-Balderas R., Morales-Cruz A.,
Cramer G.R., Delledonne M., Luo C., Ecker
J.R., Cantu D., Rank D.R., Schatz M.C.
(2016). Phased diploid genome assembly with
single-molecule real-time sequencing. Nat Methods.
13: 1050-1054.
- Corbett
MA, Kroes T, Veneziano L, Bennett MF,
Florian R, Schneider AL, Coppola A,
Licchetta L, Franceschetti S, Suppa A,
Wenger A, Mei D, Pendziwiat M, Kaya S,
Delledonne M, Straussberg R, Xumerle L,
Regan B, Crompton D, van Rootselaar AF,
Correll A, Catford R, Bisulli F, Chakraborty
S, Baldassari S, Tinuper P, Barton K,
Carswell S, Smith M, Berardelli A, Carroll
R, Gardner A, Friend KL, Blatt I, Iacomino
M, Di Bonaventura C, Striano S, Buratti J,
Keren B, Nava C, Forlani S, Rudolf G, Hirsch
E, Leguern E, Labauge P, Balestrini S,
Sander JW, Afawi Z, Helbig I, Ishiura H,
Tsuji S, Sisodiya SM, Casari G, Sadleir LG,
van Coller R, Tijssen MAJ, Klein KM, van den
Maagdenberg AMJM, Zara F, Guerrini R,
Berkovic SF, Pippucci T, Canafoglia L, Bahlo
M, Striano P, Scheffer IE, Brancati F,
Depienne C, Gecz J. (2019). Intronic ATTTC
repeat expansions in STARD7 in familial
adult myoclonic epilepsy linked to
chromosome 2. Nat Commun. 10(1): 4920
Publications related
to on-site sequencing:
- Menegon M., Cantaloni C.,
Rodriguez-Prieto A., Centomo C., Abdelfattah A.,
Rossato M., Bernardi M., Xumerle L., Loader S.,
Delledonne M. (2017). On site DNA barcoding by
nanopore sequencing. PLoS One. 12(10):e0184741.
- Maestri S, Cosentino E, Paterno M,
Freitag H, Garces JM, Marcolungo L, Alfano M,
Njunjić I, Schilthuizen M, Slik F, Menegon M,
Rossato M, Delledonne M. (2019). A Rapid and
Accurate MinION-Based Workflow for Tracking Species
Biodiversity in the Field. Genes Jun
20;10(6)
- Schilthuizen M, Clavera AP, Khoo MS,
Bondar CA, Elder CHS, Bouma, AM, Eddington TD,
Reisinger C, Cosentino E, Rossato M, Delledonne M.
(2019) Bringing the lab to the field: a new lowland
Microparmarion semi-slug (Gastropoda: Ariophantidae)
described and DNA-barcoded in the forest. J. Molluscan Studies
85: 35-40
- Freitag H, Molls C, Bouma AM, Garces
JM, Rossato M, Cosentino E, Delledonne M. (2019).
Additional new species of Grouvellinus Champion 1923
(Insecta, Coleoptera, Elmidae) discovered by citizen
scientists and DNA barcoded in the field applying a
novel MinION-based workflow, J. Natural History,
53:41-42, 2593-2620
- Freitag Het al (2021). Hydraena
(s.str.) dinarica, new species (Coleoptera:
Hydraenidae) along with further records of Hydraena
spp. from Durmitor National Park, Montenegro and
comments on the DNA barcoding problem with the
genus. Biodivers Data J. 2021 Jan
12;9:e59892.
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